Top Boothbay Harbor Hotels on the Waterfront

We checked thousands of reviews on and to find the best hotels for your stay
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Katerina Kore

Updated: 07 February 2024 · 3 min

Nestled along the picturesque coastline of Maine, Boothbay Harbor offers an idyllic retreat for travelers seeking tranquility amidst the ocean's beauty. This charming seaport town is renowned for its stunning waterfront views, making it a coveted destination for those looking to stay right on the water. With a variety of Boothbay Harbor hotels situated directly on the water, guests have the unique opportunity to wake up to the gentle lapping of waves and breathtaking sunrises over the Atlantic.

Choosing the right hotel on the water can elevate your Boothbay Harbor experience from ordinary to extraordinary. These hotels not only provide unrivaled access to the harbor's serene beauty but also serve as perfect bases for exploring the rich maritime history and natural wonders of the area. From quaint, cozy inns offering personalized services to luxury accommodations with top-notch amenities, there’s a waterfront lodging option to suit every traveler’s needs and preferences.

Embarking on a journey to Boothbay Harbor invites you to immerse yourself in a world where the charm of New England seaport life is alive and well. These hotels on the water are not just places to stay; they are gateways to adventures on the sea, from sailing and whale watching to leisurely strolls along the harbor’s edge. Let us guide you through the best Boothbay Harbor hotels on the water, ensuring your stay is as magical as the surroundings.
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Our Top 5

(Sorted by rating & number of reviews)

1. Tugboat Inn
2. Fisherman'S Wharf Inn
3. Boothbay Harbor Inn
4. Flagship Inn
5. Linekin Bay Resort

Classic Charm: Vintage Boothbay Harbor Hotels on Water

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Boothbay Harbor
Dec 29, 2025 - Dec 30, 2025

Tugboat Inn

8.1

Good

(752 Reviews)

+ 162 photos
The Tugboat Inn is not only a testament to Boothbay Harbor's maritime history, but also a uniquely charming place to stay, right on the water. This iconic hotel offers guests the chance to sleep in converted tugboats, providing an immersive experience that's as close to the sea as you can get without setting sail. Each room is carefully decorated to reflect the nautical theme, with panoramic views of the harbor that captivate and soothe. Guests can enjoy fresh, local seafood at the on-site restaurant, which boasts a deck overlooking the water. The Tugboat Inn's commitment to preserving its maritime character, combined with its modern amenities, makes it a standout choice for anyone seeking an authentic Boothbay Harbor experience.
Address: 80 Commercial Street
Rating: Good 8.1 (752 Reviews)
Rooms: 19
Price: From 150$

Fisherman'S Wharf Inn

8.0

Good

(455 Reviews)

+ 274 photos
Perfectly situated to offer stunning views of the bustling Boothbay Harbor ensures a family-friendly atmosphere with the added charm of waterfront lodging. The hotel is distinguished by its easy access to boat tours, whale watching excursions, and the Maine State Aquarium, making it an exceptional choice for families looking to immerse themselves in marine adventure. The on-site restaurant, with its kid-friendly menu and panoramic views, allows families to enjoy meals together with the backdrop of the harbor. Spacious rooms designed for family occupancy, coupled with the Inn's proximity to a variety of local attractions, make Fisherman's Wharf Inn a preferred choice for families visiting Boothbay.
Address: 22 Commercial Street
Rating: Good 8.0 (455 Reviews)
Rooms: 35
Price: From 150$

Luxurious Retreat: Boothbay Harbor Hotels on Water with Modern Luxuries

Experience the epitome of luxury at Boothbay Harbor with hotels that combine waterfront splendor with contemporary opulence. These establishments are designed for discerning travelers who seek the best of both worlds: the natural beauty of Boothbay Harbor and the pinnacle of modern hospitality. With state-of-the-art facilities, exemplary service, and meticulously designed rooms that frame stunning water views, the hotels in this section redefine indulgence. Whether it’s spa services with harbor views, gourmet dining featuring the freshest local ingredients, or private balconies that bring the ocean to your doorstep, each hotel promises an uncompromisingly luxurious stay.

Boothbay Harbor Inn

7.9

Good

(754 Reviews)

+ 103 photos
The Boothbay Harbor Inn is another fantastic waterfront accommodation, offering families spacious rooms and easy access to beaches and exploration tours. Its direct waterfront location provides an immersive experience into the maritime lifestyle, with nearby activities that Keep young adventurers engaged. The Inn also hosts evening entertainment options suitable for all ages, creating a warm and inviting atmosphere for families to unwind after a day of exploration. Their complimentary breakfast serves as a convenient start to any day’s adventure, ensuring every family member is energized and ready to go.
Address: 31 Atlantic Avenue
Rating: Good 7.9 (754 Reviews)
Rooms: 17
Price: From 200$

Flagship Inn

7.6

Good

(823 Reviews)

+ 59 photos
The Flagship Inn, while embodying affordable luxury, is a remarkable establishment that doesn’t compromise on quality or views. Strategically located to gaze upon Boothbay Harbor, this hotel offers guests a comfortable and refined stay, with each room designed to maximize the beauty of its waterfront setting. The impeccably maintained grounds include a heated outdoor pool and a hot tub, allowing guests to relax while surrounded by Maine’s natural splendor. With a commitment to providing exceptional service and amenities at a great value, The Flagship Inn is a fantastic option for travelers who wish to indulge in the luxury of Boothbay Harbor without the exorbitant price tag.
Address: 200 Townsend Avenue
Rating: Good 7.6 (823 Reviews)
Rooms: 72
Price: From 104$

Family-Friendly Escapes: Boothbay Harbor Waterfront Hotels for All Ages

Catering to families seeking memorable vacations, these Boothbay Harbor hotels on the water offer a perfect mix of fun, relaxation, and educational experiences suitable for all ages. From special children's programs to family-oriented activities like fishing, kayaking, and guided nature tours, these hotels ensure every family member finds something to love. Comfortable accommodations with easy access to Boothbay Harbor's attractions make these hotels ideal for families eager to explore the area's natural beauty and marine life while enjoying quality time together.

Linekin Bay Resort

8.5

Good

(246 Reviews)

+ 178 photos
For those who crave the vintage charm with a touch of luxury, Linekin Bay Resort offers an exquisite waterfront escape. This historic resort, set against a backdrop of towering pines and sparkling waters, provides guests with a uniquely Maine experience. Each cabin and lodge on the property reflects the rustic elegance of the bygone era, with modern amenities discreetly integrated to ensure comfort. Guests can take advantage of the private docks for an afternoon of sailing or kayaking directly from the resort. Evening fireside chats under a blanket of stars further immerse guests in the nostalgia of summer camps gone by. Linekin Bay Resort merges the enchantment of old Maine with the comforts expected by today’s traveler, making it a perfect marriage of past and present.
Address: 92 Wall Point Road
Rating: Good 8.5 (246 Reviews)
Rooms: 27
Price: From 899$

Adventure Seekers' Haven: Boothbay Harbor Hotels on the Water for Outdoor Enthusiasts

For the adventure-laden traveler, Boothbay Harbor’s waterfront hotels serve as gateways to exhilarating experiences on the Maine coast. These hotels not only offer majestic views but also provide easy access to kayaking, sailing, hiking, and more, catering to guests with a penchant for exploration and physical activity. After a day spent adventuring in the great outdoors, comfortable accommodations with thoughtful amenities welcome guests back, offering a perfect blend of thrill and relaxation.